CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ia04671
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ia04671
T023909_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia04671.1.p
B3
15
110
FFKILLPGMYEESLRLPAKFARELGARRELKLRLAGGEMMPLWDVEVFADEKRGDMHLGRGWKKFARAHDLRDGYLLVFRYDDGAASLTVMVFDRS
Pavir.Ia04671.1.p
B3
145
230
QCNLGTKQNQYLNVPVEFQDAHGYARRRRVELRMGGRSWSVNLKRGKRVRGDRTAFKYGWHQFCVDNGLEVGDTCFFRVIREGACA
Pavir.Ia04671.2.p
B3
15
110
FFKILLPGMYEESLRLPAKFARELGARRELKLRLAGGEMMPLWDVEVFADEKRGDMHLGRGWKKFARAHDLRDGYLLVFRYDDGAASLTVMVFDRS
Pavir.Ia04671.2.p
B3
145
230
QCNLGTKQNQYLNVPVEFQDAHGYARRRRVELRMGGRSWSVNLKRGKRVRGDRTAFKYGWHQFCVDNGLEVGDTCFFRVIREGACA
Pavir.Ia04671.3.p
B3
15
110
FFKILLPGMYEESLRLPAKFARELGARRELKLRLAGGEMMPLWDVEVFADEKRGDMHLGRGWKKFARAHDLRDGYLLVFRYDDGAASLTVMVFDRS
Pavir.Ia04671.3.p
B3
145
230
QCNLGTKQNQYLNVPVEFQDAHGYARRRRVELRMGGRSWSVNLKRGKRVRGDRTAFKYGWHQFCVDNGLEVGDTCFFRVIREGACA
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si036918m.g
Setaria italica
Si036918m.g
N
0.827
Sb01g043110
Sorghum bicolor
Sb01g043110
N
0.726