LjSGA_031920.1 (Lotus japonicus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 LjSGA_031920.1 T024427_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_031920.1 B3 1 60

Links

Other B3 family TFs
Other Lotus japonicus TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.831
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.831
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I 0.831
mgf023686m Mimulus guttatus mgf023686m I 0.763
OB05G32250 Oryza brachyantha OB05G32250 I 0.746
GRMZM2G018336 Zea mays GRMZM2G018336 I 0.729
GRMZM2G065538 Zea mays GRMZM2G065538 I 0.729
ORUFI05G26590 Oryza rufipogon ORUFI05G26590 N 0.729
TRIUR3_10778 Triticum urartu TRIUR3_10778 N 0.729
TRIUR3_10779 Triticum urartu TRIUR3_10779 I 0.729
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.729
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.712
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.712
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.712