CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSMUA_Achr4G24910_001
(
Musa acuminata
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
GSMUA_Achr4G24910_001
T024627_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr4P24910_001
BBR
53
346
MDEIGHRENGRHKNDQYKTAHAQWMMPHHQLKENQTIKLLMAEREKALQERDMAISEKKAALAERDTAYLQRDAAIAERNNAILERDDAIAALEYARENCMSNNSAPQQLHDAPNNQTRETPRSEAFHNSGGPETLGKLIKTKRSRKKTEVEASSSKKMTKFPRKSKKVGEDLNKVSSLKHHEWKSQDLGLNQVTFDDSSMPAPVCSCTGRYQQCYKWGNGGWQSACCTMTLSMYPLPVLPNKRHARVAGRKMSGSAFRKLLSRLAAEGHDLSLPVDLKDHWAKHGTNRYITIK
Links
Other
BBR
family TFs
Other
Musa acuminata
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
GSMUA_Achr5G03330_001
Musa acuminata
GSMUA_Achr5G03330_001
N
0.717
Bra003405
Brassica rapa
Bra003405
I
0.714
scaffold_200704.1
Arabidopsis lyrata
scaffold_200704.1
I
0.709