CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc01g110470.2
(
Solanum lycopersicum
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
Solyc01g110470.2
T024739_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc01g110470.2.1
BBR
1
313
MDDGGQRENRRHRMDYSKGCYAPWNVVPPYQMKDQEAFIMNTKIRMVFAERDAAVEERNRAVIEKKEAYAERDFAIQQRDTAFAERDTAIKERDNAIAALHFLESTTNGSLGCRTRGTKRPEQPKNHRNYNTDSVCINRDVPVADAFPISAISSEAAKALQVKRSKVNKGMSTKSAKSPRKTKKVNEDLNRHLSKDGSKAEWDAHDLGSIDQIQFDESTMPIPVCTCTGIPRQCYKWGSGGWQSSCCTTYLSEYPLPQLPNKRHARLGGRKMSGSVFSRLLTRFAVADRDLSMPIDLKTYWAKHGTNRYITIK
Links
Other
BBR
family TFs
Other
Solanum lycopersicum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
PGSC0003DMG400001660
Solanum tuberosum
PGSC0003DMG400001660
N
0.974