CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.001G243700
(
Gossypium raimondii
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Gorai.001G243700
T024856_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G243700.1
BBR
1
310
MDGAGQLENGRYKLDRYKGAHPPWNMMPQHHVKEQSNALVMNKKIMSILAERDAAIQERNIAISERKEALAARDEALQQRDKALAERDSALIERDNALAVLQCRESAKNFPFGSGIQRGRTCMHPSYHSSDTDETLNHEMHVTNALPVSTIPSAEGKSCPVKRTKVNRAVSSKSPRKIKKVAEDLNRQVDTEVRKCKSEWNSEHIGLSLINFDETKISVPVCSCTGVPRHCYKWGNGGWQSSCCTTSISSYPLPQMPNKRHARVGGRKMSGSVFTKLLSRLAAEGYDVSKPLDLKTYWARHGTNRYITIK
Gorai.001G243700.2
BBR
1
212
MDGAGQLENGRYKLDRYKGAHPPWNMMPQHHVKEQSNALVMNKKIMSILAERDAAIQERNIAISERKEALAARDEALQQRDKALAERDSALIERDNALAVLQCRESAKNFPFGSGIQRGRTCMHPSYHSSDTDETLNHEMHVTNALPVSTIPSAEGKSCPVKRTKVNRAVSSKSPRKIKKVAEDLNRQVDTEFAPAQEFPDIATSGEMVDGS
Gorai.001G243700.3
BBR
1
212
MDGAGQLENGRYKLDRYKGAHPPWNMMPQHHVKEQSNALVMNKKIMSILAERDAAIQERNIAISERKEALAARDEALQQRDKALAERDSALIERDNALAVLQCRESAKNFPFGSGIQRGRTCMHPSYHSSDTDETLNHEMHVTNALPVSTIPSAEGKSCPVKRTKVNRAVSSKSPRKIKKVAEDLNRQVDTEFAPAQEFPDIATSGEMVDGS
Gorai.001G243700.4
BBR
1
310
MDGAGQLENGRYKLDRYKGAHPPWNMMPQHHVKEQSNALVMNKKIMSILAERDAAIQERNIAISERKEALAARDEALQQRDKALAERDSALIERDNALAVLQCRESAKNFPFGSGIQRGRTCMHPSYHSSDTDETLNHEMHVTNALPVSTIPSAEGKSCPVKRTKVNRAVSSKSPRKIKKVAEDLNRQVDTEVRKCKSEWNSEHIGLSLINFDETKISVPVCSCTGVPRHCYKWGNGGWQSSCCTTSISSYPLPQMPNKRHARVGGRKMSGSVFTKLLSRLAAEGYDVSKPLDLKTYWARHGTNRYITIK
Gorai.001G243700.5
BBR
1
191
MQWNMMPQHHVKEQSNALVMNKKIMSILAERDAAIQERNIAISERKEALAARDEALQQRDKALAERDSALIERDNALAVLQCRESAKNFPFGSGIQRGRTCMHPSYHSSDTDETLNHEMHVTNALPVSTIPSAEGKSCPVKRTKVNRAVSSKSPRKIKKVAEDLNRQVDTEFAPAQEFPDIATSGEMVDGS
Gorai.001G243700.6
BBR
1
212
MDGAGQLENGRYKLDRYKGAHPPWNMMPQHHVKEQSNALVMNKKIMSILAERDAAIQERNIAISERKEALAARDEALQQRDKALAERDSALIERDNALAVLQCRESAKNFPFGSGIQRGRTCMHPSYHSSDTDETLNHEMHVTNALPVSTIPSAEGKSCPVKRTKVNRAVSSKSPRKIKKVAEDLNRQVDTEFAPAQEFPDIATSGEMVDGS
Links
Other
BBR
family TFs
Other
Gossypium raimondii
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
1.000
TCM_006767
Theobroma cacao
TCM_006767
N
0.787