CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0074s0340
(
Salix purpurea
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
SapurV1A.0074s0340
T024895_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0074s0340.1.p
BBR
5
288
MDEDNSLNIRNWGYYEPTPVKGNLGLQLMSSTMPEKPILGSRSAAIMTSVNGGFHHRDIGISQPFMPMEYTRDVWIGQREKFLNVLPGNHDYAAVLPETSSSHHMEMFQQPYSTKDEPLEQVEEAGVVEKVNGPSKTRQRHKGPKSPRAKKGKRDAQVPKPEGSPSIQRAGAAKKTAEIVINGINMDISVIPIPVCSCTGNPQQCYRWGCGGWQSACCTTCISVHPLPMSTKRRGARIAGRKMSLGAFKKVLEKLAGEGYDFSDPIDLRTHWAKHGTNKFVTIR
SapurV1A.0074s0340.2.p
BBR
5
288
MDEDNSLNIRNWGYYEPTPVKGNLGLQLMSSTMPEKPILGSRSAAIMTSVNGGFHHRDIGISQPFMPMEYTRDVWIGQREKFLNVLPGNHDYAAVLPETSSSHHMEMFQQPYSTKDEPLEQVEEAGVVEKVNGPSKTRQRHKGPKSPRAKKGKRDAQVPKPEGSPSIQRAGAAKKTAEIVINGINMDISVIPIPVCSCTGNPQQCYRWGCGGWQSACCTTCISVHPLPMSTKRRGARIAGRKMSLGAFKKVLEKLAGEGYDFSDPIDLRTHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Salix purpurea
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
POPTR_0015s05200
Populus trichocarpa
POPTR_0015s05200
N
0.916
SapurV1A.0074s0330
Salix purpurea
SapurV1A.0074s0330
N
0.865
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.833
POPTR_0012s03740
Populus trichocarpa
POPTR_0012s03740
N
0.810
POPTR_0012s03750
Populus trichocarpa
POPTR_0012s03750
N
0.788
SapurV1A.1169s0060
Salix purpurea
SapurV1A.1169s0060
N
0.766
POPTR_0015s05210
Populus trichocarpa
POPTR_0015s05210
N
0.715