CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R011515
(
Geospiza fortis
)
BED ZF,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
PF00096 (zf-C2H2)
IPR003656
IPR007087
Gfo_R011515
T025112_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R011515
BED ZF
136
166
DTSFHSMCMFCDQEFTGNRSVLLNHMAREHA
Gfo_R011515
C2H2 ZF
192
216
LQCLYCEKVFRDKNTLKDHMRKKQH
Gfo_R011515
C2H2 ZF
325
349
CRCYNCQEKFESKGGLISHMEETKH
Links
Other
BED ZF,C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF277
Taeniopygia guttata
ENSTGUG00000005465
N
1.000
ENSFALG00000009493
Ficedula albicollis
ENSFALG00000009493
N
1.000
ZNF277
Gallus gallus
ENSGALG00000009454
N
0.987
Tal_R008603
Tyto alba
Tal_R008603
N
0.974
Afo_R003554
Aptenodytes forsteri
Afo_R003554
N
0.974
ZNF277
Meleagris gallopavo
ENSMGAG00000009151
N
0.961
Aan_R002079
Calypte anna
Aan_R002079
N
0.948
ENSAPLG00000013207
Anas platyrhynchos
ENSAPLG00000013207
N
0.935
ENSBTAP00000017348-D1
Bos grunniens
ENSBTAP00000017348-D1
N
0.818
ZNF277
Oryctolagus cuniculus
ENSOCUG00000007998
N
0.818
ENSAMEG00000005673
Ailuropoda melanoleuca
ENSAMEG00000005673
N
0.792
ZNF277
Canis familiaris
ENSCAFG00000003317
N
0.792
ZNF277
Tursiops truncatus
ENSTTRG00000011667
N
0.779
ZNF277
Microcebus murinus
ENSMICG00000014129
N
0.779
ZNF277
Erinaceus europaeus
ENSEEUG00000008866
N
0.769
ZNF277
Equus caballus
ENSECAG00000019865
N
0.759
Zfp277
Mus musculus
ENSMUSG00000055917
N
0.753
ENSLACG00000008138
Latimeria chalumnae
ENSLACG00000008138
N
0.727
ENSMPUG00000007745
Mustela putorius furo
ENSMPUG00000007745
N
0.722