CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RGD1560108
(
Rattus norvegicus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ENSRNOG00000032042
T026235_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000046062
BED ZF
149
190
WRLEYLMELDGCRRGLVCMVCGGALASLKMSTIKRHIRQRHP
ENSRNOP00000046062
BED ZF
314
352
EYLMDYDGSRRGLVCMVCGGALATLKVSTIKRHILQVHP
Links
Other
BED ZF
family TFs
Other
Rattus norvegicus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C11orf95
Loxodonta africana
ENSLAFG00000020497
N
0.987
ENSOANG00000002940
Ornithorhynchus anatinus
ENSOANG00000002940
N
0.911
ENSTBEG00000006156
Tupaia belangeri
ENSTBEG00000006156
N
0.835
2700081O15Rik
Mus musculus
ENSMUSG00000053080
N
0.785
ENSOARG00000003309
Ovis aries
ENSOARG00000003309
N
0.727