CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-par_contig_94-snap-gene-0.13
(
Pythium arrhenomanes
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
maker-par_contig_94-snap-gene-0.13
T026890_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPR00000014312
BED ZF
52
107
HPAWDHFARGSKRNRFHHHAYCKYCTAHGIEPVPVRGVSGNMIRHLQKCLYCPEDI
Links
Other
BED ZF
family TFs
Other
Pythium arrhenomanes
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pag1_scaffold_46-snap-gene-0.31
Pythium aphanidermatum
maker-pag1_scaffold_46-snap-gene-0.31
N
0.932
maker-pve_contig_6-fgenesh-gene-1.4
Pythium vexans
maker-pve_contig_6-fgenesh-gene-1.4
N
0.864
maker-pir_contig_157-snap-gene-0.21
Pythium irregulare
maker-pir_contig_157-snap-gene-0.21
N
0.841
maker-piw_contig_167-snap-gene-0.12
Pythium iwayamai
maker-piw_contig_167-snap-gene-0.12
N
0.773
PITG_11027
Phytophthora infestans
PITG_11027
N
0.750
F443_06203
Phytophthora parasitica
F443_06203
N
0.750
Physo142300
Phytophthora sojae
Physo142300
N
0.750
gw1.12.354.1
Phytophthora capsici
gw1.12.354.1
N
0.705
fgenesh_scip_prom.28083.3521
Phytophthora lateralis
fgenesh_scip_prom.28083.3521
N
0.705