CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART08G04880
(
Oryza barthii
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OBART08G04880
T027068_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART08G04880.1
BED ZF
96
146
SKVWDEYKPIYVNGVVQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICR
OBART08G04880.2
BED ZF
96
146
SKVWDEYKPIYVNGVVQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICR
OBART08G04880.3
BED ZF
96
146
SKVWDEYKPIYVNGVVQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICR
OBART08G04880.4
BED ZF
96
146
SKVWDEYKPIYVNGVVQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICR
Links
Other
BED ZF
family TFs
Other
Oryza barthii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM08G05130
Oryza glumaepatula
OGLUM08G05130
N
1.000
OLONG_005373
Oryza longistaminata
OLONG_005373
N
1.000
Traes_4DL_1797B7457
Triticum aestivum
Traes_4DL_1797B7457
N
0.837
Traes_2DL_2E5B5D06B
Triticum aestivum
Traes_2DL_2E5B5D06B
N
0.791