CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA04G24720
(
Oryza nivara
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ONIVA04G24720
T027110_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA04G24720.2
BED ZF
138
186
SEAWAHFKEENGKPGKARCIHCHTVVKCSSDKGTSVLHNHLKSSSCNKK
Links
Other
BED ZF
family TFs
Other
Oryza nivara
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART04G26290
Oryza barthii
OBART04G26290
N
0.727
ORGLA04G0227900
Oryza glaberrima
ORGLA04G0227900
N
0.727
OBART04G26300
Oryza barthii
OBART04G26300
N
0.714
BGIOSGA017162
Oryza indica
BGIOSGA017162
N
0.705
OLONG_018092
Oryza longistaminata
OLONG_018092
N
0.705
OMERI04G21350
Oryza meridionalis
OMERI04G21350
N
0.705
ORUFI04G07440
Oryza rufipogon
ORUFI04G07440
N
0.705
ORUFI04G27440
Oryza rufipogon
ORUFI04G27440
N
0.705