CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA09G0063700
(
Oryza glaberrima
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
ORGLA09G0063700
T027155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA09G0063700.1
BED ZF
98
144
SKVWDDFTPIYIDGKLARAECMHCHQVFNSNSTNGTSRLLKHQAKCS
Links
Other
BED ZF
family TFs
Other
Oryza glaberrima
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA09G07590
Oryza nivara
ONIVA09G07590
N
1.000
OPUNC09G07350
Oryza punctata
OPUNC09G07350
N
1.000
OS09G0381800
Oryza sativa
OS09G0381800
N
1.000
OMERI03G02680
Oryza meridionalis
OMERI03G02680
N
0.977
ORUFI09G09250
Oryza rufipogon
ORUFI09G09250
N
0.902
OS09G0382120
Oryza sativa
OS09G0382120
N
0.902
BGIOSGA029844
Oryza indica
BGIOSGA029844
N
0.854
TRIUR3_10469
Triticum urartu
TRIUR3_10469
N
0.833
MLOC_80500
Hordeum vulgare
MLOC_80500
N
0.814
MLOC_81246
Hordeum vulgare
MLOC_81246
N
0.791
Traes_5DL_8547B9A26
Triticum aestivum
Traes_5DL_8547B9A26
N
0.786
Pavir.Ba02216
Panicum virgatum
Pavir.Ba02216
N
0.714