CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra77061
(
Phytophthora ramorum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Phyra77061
T027280_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra77061
BED ZF
62
110
SVVWETFTPLSSSGSRDGLIDSARCSICNKIFSTRHGTSSMMRHAKRHN
Links
Other
BED ZF
family TFs
Other
Phytophthora ramorum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.490
Phytophthora lateralis
fgenesh_scip_prom.28083.490
N
0.977
Physo143849
Phytophthora sojae
Physo143849
N
0.930
fgenesh_scip_prom.46568.175
Phytophthora kernoviae
fgenesh_scip_prom.46568.175
N
0.907
PYU1_G011346
Pythium ultimum
PYU1_G011346
N
0.884
maker-piw_contig_957-snap-gene-0.6
Pythium iwayamai
maker-piw_contig_957-snap-gene-0.6
N
0.884
fgenesh-pve_contig_606-abinit-gene-0.33
Pythium vexans
fgenesh-pve_contig_606-abinit-gene-0.33
N
0.837
fgenesh-pag1_scaffold_236-abinit-gene-0.77
Pythium aphanidermatum
fgenesh-pag1_scaffold_236-abinit-gene-0.77
N
0.814
fgenesh-pir_contig_203-abinit-gene-0.79
Pythium irregulare
fgenesh-pir_contig_203-abinit-gene-0.79
N
0.814
ALNC14_006200
Albugo laibachii
ALNC14_006200
N
0.791
snap-par_contig_1069-abinit-gene-0.14
Pythium arrhenomanes
snap-par_contig_1069-abinit-gene-0.14
N
0.767