CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0019s00700
(
Populus trichocarpa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
POPTR_0019s00700
T027391_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0019s00700.1
BED ZF
14
61
RSFWEYVEKMDDGRMRCKFCGHCFAERTSISRIKLHLAGVTGRGVKTC
Links
Other
BED ZF
family TFs
Other
Populus trichocarpa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0749s0010
Salix purpurea
SapurV1A.0749s0010
N
0.829
SapurV1A.1585s0040
Salix purpurea
SapurV1A.1585s0040
N
0.829
SapurV1A.1803s0010
Salix purpurea
SapurV1A.1803s0010
N
0.780
SapurV1A.0856s0060
Salix purpurea
SapurV1A.0856s0060
N
0.756