CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF5g02501
(
Pseudozyma brasiliensis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
PSEUBRA_SCAF5g02501
T027500_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST05657
BED ZF
26
54
IKKIEISQHSKYTCTFCGKDSVKRKAVGI
EST05657
BED ZF
48
87
KRKAVGIWECRACKKVMAGGAWTLSTSAAATVRSTIRRLR
Links
Other
BED ZF
family TFs
Other
Pseudozyma brasiliensis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PaG_00879
Pseudozyma aphidis
PaG_00879
N
1.000
sr10972.2
Sporisorium reilianum
sr10972.2
N
1.000
UHOR_04047
Ustilago hordei
UHOR_04047
N
1.000
UM02518
Ustilago maydis
UM02518
N
0.827
BOTBODRAFT_141296
Botryobasidium botryosum
BOTBODRAFT_141296
N
0.808
JAAARDRAFT_31164
Jaapia argillacea
JAAARDRAFT_31164
N
0.808
K437DRAFT_279298
Tilletiaria anomala
K437DRAFT_279298
N
0.788
DME_0000315401
Dracunculus medinensis
DME_0000315401
N
0.745
DI09_34p210
Microsporidia sp
DI09_34p210
N
0.725