CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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bed-1
(
Caenorhabditis elegans
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
WBGene00012674
T027898_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y39B6A.12a
BED ZF
58
100
SIVWEHITWVAESQRAACNYCAAEFQVKGGTSALLRHLKTIHP
Y39B6A.12b
BED ZF
58
100
SIVWEHITWVAESQRAACNYCAAEFQVKGGTSALLRHLKTIHP
Links
Other
BED ZF
family TFs
Other
Caenorhabditis elegans
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE27858
Caenorhabditis remanei
CRE27858
N
0.907
CBG20523
Caenorhabditis briggsae
CBG20523
N
0.884
CBN04980
Caenorhabditis brenneri
CBN04980
N
0.814