CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_2722000001
(
Branchiostoma floridae
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
fgenesh2_pg.scaffold_2722000001
T028102_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_2722000001
BED ZF
208
242
LATMKQPNGKFRCAHCAKEYVREKNFTKHLEKEHN
Links
Other
BED ZF
family TFs
Other
Branchiostoma floridae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_pg.scaffold_116000018
Branchiostoma floridae
fgenesh2_pg.scaffold_116000018
N
0.971
fgenesh2_pg.scaffold_326000044
Branchiostoma floridae
fgenesh2_pg.scaffold_326000044
N
0.971