CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene18345-v1.0-hybrid
(
Fragaria vesca
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
gene18345-v1.0-hybrid
T028292_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna18345.1-v1.0-hybrid
BED ZF
58
107
NITWDHFALMKNPDGTPLAKPRAKCNHCPQTYGCDTRSNGTSNMKNHRIR
Links
Other
BED ZF
family TFs
Other
Fragaria vesca
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene12006-v1.0-hybrid
Fragaria vesca
gene12006-v1.0-hybrid
N
0.878
gene18339-v1.0-hybrid
Fragaria vesca
gene18339-v1.0-hybrid
N
0.773
gene07401-v1.0-hybrid
Fragaria vesca
gene07401-v1.0-hybrid
N
0.750
gene30452-v1.0-hybrid
Fragaria vesca
gene30452-v1.0-hybrid
N
0.710