CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.001G093000
(
Gossypium raimondii
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Gorai.001G093000
T028324_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G093000.1
BED ZF
16
60
DPAWNHCEVFKNGERLQIKCMYCGKLFKGGGIHRFKEHLAGRKGQ
Links
Other
BED ZF
family TFs
Other
Gossypium raimondii
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_002022
Theobroma cacao
TCM_002022
N
0.949
30143.m001167
Ricinus communis
30143.m001167
N
0.769
Gorai.013G021900
Gossypium raimondii
Gorai.013G021900
N
0.769
TCM_042727
Theobroma cacao
TCM_042727
N
0.718
evm.TU.supercontig_1.434
Carica papaya
evm.TU.supercontig_1.434
N
0.718
MDP0000217734
Malus domestica
MDP0000217734
N
0.714
MDP0000276134
Malus domestica
MDP0000276134
N
0.714