CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10000517.g
(
Linum usitatissimum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Lus10000517.g
T028370_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10000517
BED ZF
16
65
DPAWKHCQMFKNGDRVQLQCVYCTKVFKGGGIHRIKEHLAGQKGNASTCL
Links
Other
BED ZF
family TFs
Other
Linum usitatissimum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30143.m001167
Ricinus communis
30143.m001167
N
0.905
MDP0000217734
Malus domestica
MDP0000217734
N
0.881
MDP0000276134
Malus domestica
MDP0000276134
N
0.881
evm.TU.supercontig_1.434
Carica papaya
evm.TU.supercontig_1.434
N
0.857
gene26335-v1.0-hybrid
Fragaria vesca
gene26335-v1.0-hybrid
N
0.857
Gorai.013G021900
Gossypium raimondii
Gorai.013G021900
N
0.857
GLYMA11G34201
Glycine max
GLYMA11G34201
N
0.837
GLYMA18G04105
Glycine max
GLYMA18G04105
N
0.837
Aquca_009_00913
Aquilegia coerulea
Aquca_009_00913
N
0.791
OB03G46220
Oryza brachyantha
OB03G46220
N
0.721
TCM_042727
Theobroma cacao
TCM_042727
N
0.721