CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000282741
(
Malus domestica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
MDP0000282741
T028397_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000282741
BED ZF
29
88
DVGWEYGILANPTNSDKVKCKLCDKIISGGVHRLKQHVANIRGNVAACTKSSDEDKAKCR
Links
Other
BED ZF
family TFs
Other
Malus domestica
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000679950
Malus domestica
MDP0000679950
N
0.806
MDP0000280280
Malus domestica
MDP0000280280
N
0.805
MDP0000207354
Malus domestica
MDP0000207354
N
0.756
MDP0000750292
Malus domestica
MDP0000750292
N
0.756
Sb04g017410
Sorghum bicolor
Sb04g017410
N
0.714
Sb05g007535
Sorghum bicolor
Sb05g007535
N
0.714
gene04769-v1.0-hybrid
Fragaria vesca
gene04769-v1.0-hybrid
N
0.714
Thhalv10002303m.g
Eutrema salsugineum
Thhalv10002303m.g
N
0.703