CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000310856
(
Malus domestica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
MDP0000310856
T028403_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000310856
BED ZF
17
67
DVAWKYAHPIEGNKHGTICTFCESTFQSGGITRLKYHLAGFDPHKSVKKCK
Links
Other
BED ZF
family TFs
Other
Malus domestica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppb012454mg
Prunus persica
PRUPE_ppb012454mg
N
0.930
MDP0000154767
Malus domestica
MDP0000154767
N
0.930
MDP0000308023
Malus domestica
MDP0000308023
N
0.930
MDP0000280176
Malus domestica
MDP0000280176
N
0.884
gene25660-v1.0-hybrid
Fragaria vesca
gene25660-v1.0-hybrid
N
0.744