Pavir.Fa02339 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Fa02339 T028487_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa02339.1.p BED ZF 216 268

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Gb00931 Panicum virgatum Pavir.Gb00931 N 0.932
Pavir.Ga00028 Panicum virgatum Pavir.Ga00028 N 0.886
Pavir.J40131 Panicum virgatum Pavir.J40131 N 0.841
ORUFI04G07440 Oryza rufipogon ORUFI04G07440 N 0.773
BGIOSGA017162 Oryza indica BGIOSGA017162 N 0.714
OBART04G26300 Oryza barthii OBART04G26300 N 0.714
OLONG_018092 Oryza longistaminata OLONG_018092 N 0.714
ORUFI04G27440 Oryza rufipogon ORUFI04G27440 N 0.714