CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Hb00851
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Hb00851
T028510_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Hb00851.1.p
BED ZF
29
77
SKVWEYYEQNLVAVDNILKAVCKFCGMHLSTKSGTSSLRTHIAEYCAKI
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ba02799
Panicum virgatum
Pavir.Ba02799
N
0.750
Pavir.Fa01217
Panicum virgatum
Pavir.Fa01217
N
0.727
Pavir.Ha01010
Panicum virgatum
Pavir.Ha01010
N
0.727
Pavir.Cb01644
Panicum virgatum
Pavir.Cb01644
N
0.705
Pavir.J36107
Panicum virgatum
Pavir.J36107
N
0.705