CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J13220
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J13220
T028571_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J13220.1.p
BED ZF
35
79
SKVWKDFIPFYVEGRVQGADCVHCHKRLSADKGRSHLNRHTQTCP
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA08G0042000
Oryza glaberrima
ORGLA08G0042000
N
0.837
BRADI3G15357
Brachypodium distachyon
BRADI3G15357
N
0.762