CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J24456
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J24456
T028611_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J24456.1.p
BED ZF
13
62
DPGWKYGFWPNVLKKEMVQCIFCKKVVPAGIKRFKQHLAGGFGDAVKCPK
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J23427
Panicum virgatum
Pavir.J23427
N
0.905
Pavir.J25098
Panicum virgatum
Pavir.J25098
N
0.881
Pavir.Fb00998
Panicum virgatum
Pavir.Fb00998
N
0.833