CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J24962
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J24962
T028612_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J24962.1.p
BED ZF
68
103
VDGVVVAAECKHCARNIRAERKHGTSSLRKHLKRCN
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J40684
Panicum virgatum
Pavir.J40684
N
0.939
Pavir.J15303
Panicum virgatum
Pavir.J15303
N
0.909
Pavir.Ea01456
Panicum virgatum
Pavir.Ea01456
N
0.879
Pavir.Ab00601
Panicum virgatum
Pavir.Ab00601
N
0.758
Pavir.Fa01178
Panicum virgatum
Pavir.Fa01178
N
0.727