CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10010053m.g
(
Eutrema salsugineum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Thhalv10010053m.g
T028717_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10010053m
BED ZF
35
82
LTWKYVSETVDSKGKKVTACDFCGKQYVGISRMKQHLAGLNQSRTACK
Links
Other
BED ZF
family TFs
Other
Eutrema salsugineum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo8g077300
Brassica oleracea
Bo8g077300
N
0.854
Cagra.0005s0005
Capsella grandiflora
Cagra.0005s0005
N
0.721