CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc16066
(
Meloidogyne incognita
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Minc16066
T028992_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc16066
BED ZF
41
83
HSLLRYFQYSRGEPFGTCRICQKEIRRTQGNTNGMTKHLMKHP
Minc16066
BED ZF
155
202
SLLRYYQYDRGDPSAICRICQKRISRKKGNTKGTTRHLMLHPSFFKQF
Links
Other
BED ZF
family TFs
Other
Meloidogyne incognita
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf07242-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf07242-augustus-gene-0.6
N
1.000
MhA1_Contig825.frz3.gene10
Meloidogyne hapla
MhA1_Contig825.frz3.gene10
N
0.848