CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GPUH_0002273201
(
Gongylonema pulchrum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
GPUH_0002273201
T029355_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002273201-mRNA-1
BED ZF
29
73
HPVWGFFKDLRNSEGMGGVFCEHCAWESDDRSPNNLKAHLKQCHL
Links
Other
BED ZF
family TFs
Other
Gongylonema pulchrum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g25671
Steinernema feltiae
L889_g25671
N
0.721
ASIM_0001581701
Anisakis simplex
ASIM_0001581701
N
0.721
GPLIN_000010400
Globodera pallida
GPLIN_000010400
N
0.721
TCNE_0000235701
Toxocara canis
TCNE_0000235701
N
0.714