CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig138.frz3.gene46
(
Meloidogyne hapla
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
MhA1_Contig138.frz3.gene46
T029490_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig138.frz3.gene46
BED ZF
2
45
SEVWNHFYMAPNGLSVNCNHCGKFMKRSDSSTKSMWGHLKAFHS
Links
Other
BED ZF
family TFs
Other
Meloidogyne hapla
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc15097
Meloidogyne incognita
Minc15097
N
1.000
maker-nMf.1.1.scaf03800-snap-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf03800-snap-gene-0.6
N
1.000
maker-nMf.1.1.scaf08609-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08609-augustus-gene-0.4
N
1.000
Minc10185
Meloidogyne incognita
Minc10185
N
0.953
GPLIN_000010300
Globodera pallida
GPLIN_000010300
N
0.907