CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig3056.frz3.gene1
(
Meloidogyne hapla
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
MhA1_Contig3056.frz3.gene1
T029509_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig3056.frz3.gene1
BED ZF
6
55
AIWEINLFKKLNVDQAECKQCKEDGRETIIIPRKGGNTKGLITHLENSHK
Links
Other
BED ZF
family TFs
Other
Meloidogyne hapla
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig1189.frz3.gene14
Meloidogyne hapla
MhA1_Contig1189.frz3.gene14
N
1.000
MhA1_Contig1555.frz3.fgene2
Meloidogyne hapla
MhA1_Contig1555.frz3.fgene2
N
1.000