CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001684501
(
Nippostrongylus brasiliensis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
NBR_0001684501
T029540_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001684501-mRNA-1
BED ZF
41
84
SEIWDHYRLLNENQNVECVYCWKVLKRGDSSTKSMWGHMTAFHQ
Links
Other
BED ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICVIV_10568
Dictyocaulus viviparus
DICVIV_10568
N
1.000
HCOI01730700
Haemonchus contortus
HCOI01730700
N
1.000
HPBE_0001987701
Heligmosomoides bakeri
HPBE_0001987701
N
1.000
SVUK_0001376701
Strongylus vulgaris
SVUK_0001376701
N
1.000
SVUK_0002086401
Strongylus vulgaris
SVUK_0002086401
N
1.000
ANCCAN_21647
Ancylostoma caninum
ANCCAN_21647
N
0.953
ANCDUO_12756
Ancylostoma duodenale
ANCDUO_12756
N
0.953
ANCDUO_16960
Ancylostoma duodenale
ANCDUO_16960
N
0.953
CJA17319
Caenorhabditis japonica
CJA17319
N
0.814
CRE01078
Caenorhabditis remanei
CRE01078
N
0.814