CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0002096501
(
Nippostrongylus brasiliensis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
NBR_0002096501
T029543_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0002096501-mRNA-1
BED ZF
203
242
NPVWPYFDVIDGTARCKQCLYSTKSVFSTNLKVHLRSHHR
Links
Other
BED ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OESDEN_19804
Oesophagostomum dentatum
OESDEN_19804
N
1.000
TELCIR_00912
Teladorsagia circumcincta
TELCIR_00912
N
1.000
ANCCAN_16864
Ancylostoma caninum
ANCCAN_16864
N
0.975
ANCCAN_22845
Ancylostoma caninum
ANCCAN_22845
N
0.975
ANCCEY_01033
Ancylostoma ceylanicum
ANCCEY_01033
N
0.975
DICVIV_08913
Dictyocaulus viviparus
DICVIV_08913
N
0.975
HCOI00290700
Haemonchus contortus
HCOI00290700
N
0.975
NECAME_15823
Necator americanus
NECAME_15823
N
0.975
scaffold642-EXSNAP2012.20
Pristionchus exspectatus
scaffold642-EXSNAP2012.20
N
0.875
WUBG_00746
Wuchereria bancrofti
WUBG_00746
N
0.800
BTMF_0000102201
Brugia timori
BTMF_0000102201
N
0.800
PEQ_0000147601
Parascaris equorum
PEQ_0000147601
N
0.800