CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g02279
(
Litomosoides sigmodontis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
nLs.2.1.2.g02279
T029566_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t02279-RA
BED ZF
16
54
ALCRISSAKSAVQVRCRACQEVLSCPLALREHCESRAHS
nLs.2.1.2.t02279-RA
BED ZF
82
114
SMSPSPETILECRHCSFETTDTAGAIEHMQQHR
Links
Other
BED ZF
family TFs
Other
Litomosoides sigmodontis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_01211
Wuchereria bancrofti
WUBG_01211
N
0.826
Bm12964
Brugia malayi
Bm12964
N
0.812
nAv.1.0.1.g03639
Acanthocheilonema viteae
nAv.1.0.1.g03639
N
0.783
WBGene00237283
Onchocerca volvulus
WBGene00237283
N
0.768