CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g07197
(
Litomosoides sigmodontis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
nLs.2.1.2.g07197
T029571_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t07197-RA
BED ZF
46
101
SVVWRYFDLYESDGYSRADTERIVKCRLMSCMRKELRLDAQSSTKGMWEHLRNKHP
Links
Other
BED ZF
family TFs
Other
Litomosoides sigmodontis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_05365
Wuchereria bancrofti
WUBG_05365
N
1.000
Bm9365
Brugia malayi
Bm9365
N
1.000
LOAG_16819
Loa loa
LOAG_16819
N
1.000
WBGene00239169
Onchocerca volvulus
WBGene00239169
N
1.000
BTMF_0001662301
Brugia timori
BTMF_0001662301
N
1.000
EEL_0000723701
Elaeophora elaphi
EEL_0000723701
N
1.000
nAv.1.0.1.g05836
Acanthocheilonema viteae
nAv.1.0.1.g05836
N
1.000
nDi.2.2.2.g01864
Dirofilaria immitis
nDi.2.2.2.g01864
N
1.000
nOo.2.0.1.g03635
Onchocerca ochengi
nOo.2.0.1.g03635
N
1.000
OFLC_0001355801
Onchocerca flexuosa
OFLC_0001355801
N
1.000
TCLT_0000219701
Thelazia callipaeda
TCLT_0000219701
N
0.932
GPUH_0001855101
Gongylonema pulchrum
GPUH_0001855101
N
0.909