CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nLs.2.1.2.g07664
(
Litomosoides sigmodontis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
nLs.2.1.2.g07664
T029573_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t07664-RA
BED ZF
211
256
HPVWNFFKFYKSGGLTLGYMCLMCGNGFTGPPNTTNATKHLRCKHK
Links
Other
BED ZF
family TFs
Other
Litomosoides sigmodontis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_03479
Wuchereria bancrofti
WUBG_03479
N
1.000
Bm9318
Brugia malayi
Bm9318
N
1.000
LOAG_06196
Loa loa
LOAG_06196
N
1.000
WBGene00242826
Onchocerca volvulus
WBGene00242826
N
1.000
EEL_0000083601
Elaeophora elaphi
EEL_0000083601
N
1.000
nAv.1.0.1.g00796
Acanthocheilonema viteae
nAv.1.0.1.g00796
N
1.000
nDi.2.2.2.g08807
Dirofilaria immitis
nDi.2.2.2.g08807
N
1.000
nOo.2.0.1.g03156
Onchocerca ochengi
nOo.2.0.1.g03156
N
1.000
OFLC_0001405301
Onchocerca flexuosa
OFLC_0001405301
N
1.000
TCLT_0000313501
Thelazia callipaeda
TCLT_0000313501
N
0.977
GPUH_0000005801
Gongylonema pulchrum
GPUH_0000005801
N
0.864