CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nOo.2.0.1.g03531
(
Onchocerca ochengi
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
nOo.2.0.1.g03531
T029581_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t03531-RA
BED ZF
527
567
AVPVTLVDKQHARCGICNAVVSLNRKFEVVHLVRHFNAWHP
nOo.2.0.1.t03531-RA
BED ZF
748
785
RYVEAVNDCHWKCKICNGDILAAVISAGAIRHFRTEHP
nOo.2.0.1.t03531-RA
BED ZF
807
845
CMEFINPQLIECLVCNMTYMLHRPFNMCRAIRHLRSKHP
Links
Other
BED ZF
family TFs
Other
Onchocerca ochengi
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00238764
Onchocerca volvulus
WBGene00238764
N
1.000
OFLC_0001503001
Onchocerca flexuosa
OFLC_0001503001
N
1.000
EVEC_0000723001
Enterobius vermicularis
EVEC_0000723001
N
0.835
ASU_07678
Ascaris suum
ASU_07678
N
0.830
SMUV_0000958401
Syphacia muris
SMUV_0000958401
N
0.812
L893_g8109
Steinernema glaseri
L893_g8109
N
0.706