CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0001682900
(
Parastrongyloides trichosuri
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
PTRK_0001682900
T029646_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0001682900.1
BED ZF
208
253
HPVWQFFKDLKDCGLDENGVICLNCDWKGDDKSPNNLKTHLKRCHE
Links
Other
BED ZF
family TFs
Other
Parastrongyloides trichosuri
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0001000900
Strongyloides papillosus
SPAL_0001000900
N
1.000
SSTP_0000392500
Strongyloides stercoralis
SSTP_0000392500
N
1.000
SVE_1854500
Strongyloides venezuelensis
SVE_1854500
N
1.000
ASIM_0001581701
Anisakis simplex
ASIM_0001581701
N
0.767
PTRK_0000381700
Parastrongyloides trichosuri
PTRK_0000381700
N
0.767
RSKR_0000496500
Rhabditophanes kr3021
RSKR_0000496500
N
0.767
TCNE_0000235701
Toxocara canis
TCNE_0000235701
N
0.762
RSKR_0000161800
Rhabditophanes kr3021
RSKR_0000161800
N
0.744
SPAL_0000125700
Strongyloides papillosus
SPAL_0000125700
N
0.721
SSTP_0000423800
Strongyloides stercoralis
SSTP_0000423800
N
0.721