CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g065460
(
Brassica oleracea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Bo9g065460
T031309_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g065460.1
bHLH
85
136
QRITHIAVERNRRRQMNQHLSVLRSLMPQPFAQKGDQASIVGGAIDFIKELE
Links
Other
bHLH
family TFs
Other
Brassica oleracea
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0751s0031
Capsella grandiflora
Cagra.0751s0031
N
0.914
Thhalv10000961m.g
Eutrema salsugineum
Thhalv10000961m.g
N
0.914
Carubv10026748m.g
Capsella rubella
Carubv10026748m.g
N
0.914
Bostr.28243s0066
Boechera stricta
Bostr.28243s0066
N
0.914
Bra025007
Brassica rapa
Bra025007
N
0.914
bHLH071
Arabidopsis lyrata
fgenesh2_kg.8__126__AT5G46690.1
N
0.914
BHLH71
Arabidopsis thaliana
AT5G46690
N
0.914
Bo7g075600
Brassica oleracea
Bo7g075600
N
0.914
Bra017533
Brassica rapa
Bra017533
N
0.914
Cagra.10175s0007
Capsella grandiflora
Cagra.10175s0007
N
0.851
Bostr.7365s0007
Boechera stricta
Bostr.7365s0007
N
0.851
Carubv10001470m.g
Capsella rubella
Carubv10001470m.g
N
0.851
BHLH57
Arabidopsis thaliana
AT4G01460
N
0.851
Bo9g004020
Brassica oleracea
Bo9g004020
N
0.851
Bra037414
Brassica rapa
Bra037414
N
0.851
Thhalv10028815m.g
Eutrema salsugineum
Thhalv10028815m.g
N
0.851
Traes_4BL_A48C29364
Triticum aestivum
Traes_4BL_A48C29364
N
0.850
MLOC_10595
Hordeum vulgare
MLOC_10595
N
0.850
Traes_4AL_EE88645E2
Triticum aestivum
Traes_4AL_EE88645E2
N
0.850
Traes_4DL_A76BE77E4
Triticum aestivum
Traes_4DL_A76BE77E4
N
0.850
GSMUA_Achr10G19180_001
Musa acuminata
GSMUA_Achr10G19180_001
N
0.848
evm.TU.supercontig_55.64
Carica papaya
evm.TU.supercontig_55.64
N
0.848
e_gw1.519.9.1
Physcomitrella patens
e_gw1.519.9.1
N
0.840