CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE19205
(
Caenorhabditis remanei
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CRE19205
T032459_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mxl-3
M00935_2.00
Caenorhabditis elegans
RCACGTGS
SCACGTGY
PBM
Grove et al.(2009)
MXL3
0.886
0.904
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE19205
bHLH
53
104
RRAHHNELERRRRDHIKDHFVILKDSIPLLEGEKSSRALILKRAVEYISVMQ
Links
Other
bHLH
family TFs
Other
Caenorhabditis remanei
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG07781
Caenorhabditis briggsae
CBG07781
I
0.914
TCNE_0000925601
Toxocara canis
TCNE_0000925601
I
0.914
CJA15946
Caenorhabditis japonica
CJA15946
I
0.886
mxl-3
Caenorhabditis elegans
WBGene00003511
D
0.886
BXY_0335900
Bursaphelenchus xylophilus
BXY_0335900
I
0.882
EVEC_0001205701
Enterobius vermicularis
EVEC_0001205701
N
0.864
scaffold172-EXSNAP2012.1
Pristionchus exspectatus
scaffold172-EXSNAP2012.1
N
0.858
CBN05688
Caenorhabditis brenneri
CBN05688
I
0.856
PTRK_0000692900
Parastrongyloides trichosuri
PTRK_0000692900
N
0.854
SPAL_0001708300
Strongyloides papillosus
SPAL_0001708300
N
0.854
SSTP_0000161600
Strongyloides stercoralis
SSTP_0000161600
N
0.854
SVE_0882600
Strongyloides venezuelensis
SVE_0882600
N
0.854