CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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bhlhe23
(
Danio rerio
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDARG00000037588
T033677_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in neuron differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within cell development and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in basal plate midbrain region; brain; neurons; and retinal inner nuclear layer. Orthologous to human BHLHE23 (basic helix-loop-helix family member e23). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLHE23
M02784_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Jolma et al.(2013)
BHLHE23_1
0.890
0.964
BHLHE23
M04108_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX
0.890
0.964
BHLHE23
M04110_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX
0.890
0.964
BHLHE23
M04109_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX
0.890
0.964
BHLHE23
M04111_2.00
Homo sapiens
RVCATATGBY
RVCATATGBY
SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX
0.890
0.964
Bhlhe22
M01729_2.00
Mus musculus
NVCATATGGN
NCCATATGBN
PBM
Weirauch et al.(2014)
pTH5267
0.890
0.927
BHLHE22
M02804_2.00
Homo sapiens
NAVCATATGBTN
NAVCATATGBTN
SELEX
Jolma et al.(2013)
BHLHE22_1
0.890
0.927
Oli
M03618_2.00
Drosophila melanogaster
AMCATATGKY
RMCATATGKT
SELEX
Nitta et al.(2015)
Oli_1
0.890
0.927
BHLHE22
M04199_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX
0.890
0.927
Oli
M05985_2.00
Drosophila melanogaster
SACCATATGKY
RMCATATGGTS
B1H
Zhu et al.(2011)
Oli_da_SANGER_5_1_FBgn0032651
0.890
0.927
Oli
M05986_2.00
Drosophila melanogaster
AHSBNRCCATMTGKY
RMCAKATGGYNVSDT
B1H
Zhu et al.(2011)
Oli_da_SANGER_5_2_FBgn0032651
0.890
0.927
Oli
M05987_2.00
Drosophila melanogaster
MCATCTGKY
RMCAGATGK
B1H
Zhu et al.(2011)
Oli_da_SANGER_5_3_FBgn0032651
0.890
0.927
BHLHE22
M04200_2.00
Homo sapiens
AVCATATGBY
RVCATATGBT
SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX
0.890
0.927
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000054735
bHLH
105
159
LRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIATLLLAKNYILMQA
Links
Other
bHLH
family TFs
Other
Danio rerio
TFs
141 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCINX007709
Melitaea cinxia
MCINX007709
I
0.914
ENSXMAG00000020159
Xiphophorus maculatus
ENSXMAG00000020159
I
0.914
CpipJ_CPIJ000843
Culex pipiens
CpipJ_CPIJ000843
I
0.914
bhlhe22
Takifugu rubripes
ENSTRUG00000007963
I
0.914
PHUM507440
Pediculus humanus
PHUM507440
I
0.914
SPU_004028
Strongylocentrotus purpuratus
SPU_004028
I
0.914
Afo_R010903
Aptenodytes forsteri
Afo_R010903
I
0.914
YQE_08596
Dendroctonus ponderosae
YQE_08596
I
0.914
tetur13g02560
Tetranychus urticae
tetur13g02560
I
0.914
SPU_026601
Strongylocentrotus purpuratus
SPU_026601
I
0.914
bhlhe23
Takifugu rubripes
ENSTRUG00000005237
I
0.914
bhlhe22
Takifugu rubripes
ENSTRUG00000003506
I
0.914
BHLHE23
Procavia capensis
ENSPCAG00000008163
I
0.914
ENSPANG00000014258
Papio anubis
ENSPANG00000014258
I
0.914
bhlhe23
Oryzias latipes
ENSORLG00000009742
I
0.914
bhlhe22
Oryzias latipes
ENSORLG00000008625
I
0.914
ENSPFOG00000020648
Poecilia formosa
ENSPFOG00000020648
I
0.914
ENSPFOG00000020723
Poecilia formosa
ENSPFOG00000020723
I
0.914
bhlhe23
Tetraodon nigroviridis
ENSTNIG00000017879
I
0.914
bhlhe22
Tetraodon nigroviridis
ENSTNIG00000012697
I
0.914
ENSSHAG00000008128
Sarcophilus harrisii
ENSSHAG00000008128
I
0.914
Bhlhe23
Rattus norvegicus
ENSRNOG00000010312
I
0.914
ENSBTAP00000014445-D1
Bos grunniens
ENSBTAP00000014445-D1
I
0.914
Ogr12490
Ophisaurus gracilis
Ogr12490
I
0.914
AMEC008134
Anopheles melas
AMEC008134
I
0.914
AFUN005189
Anopheles funestus
AFUN005189
I
0.914
AFAF017781
Anopheles farauti
AFAF017781
I
0.914
AEPI003977
Anopheles epiroticus
AEPI003977
I
0.914
AMEM014256
Anopheles merus
AMEM014256
I
0.914
AMIN009758
Anopheles minimus
AMIN009758
I
0.914
BGLB010842
Biomphalaria glabrata
BGLB010842
I
0.914
ASTEI052404
Anopheles stephensi
ASTEI052404
I
0.914
ASIS008310
Anopheles sinensis
ASIS008310
I
0.914
AQUA010475
Anopheles quadriannulatus
AQUA010475
I
0.914
ADIR006306
Anopheles dirus
ADIR006306
I
0.914
ACUA002460
Anopheles culicifacies
ACUA002460
I
0.914
bhlhe23
Xenopus tropicalis
XB-GENE-1018550
I
0.914
SMU15011543
Schmidtea mediterranea
SMU15011543
I
0.914
fgenesh2_pg.scaffold_122000082
Branchiostoma floridae
fgenesh2_pg.scaffold_122000082
I
0.914
Pvit_14990
Pogona vitticeps
Pvit_14990
I
0.914
bhlhe22
Xenopus tropicalis
XB-GENE-6457792
I
0.914
AALB000147
Anopheles albimanus
AALB000147
I
0.914
ACOM027056
Anopheles coluzzii
ACOM027056
I
0.914
ACHR009203
Anopheles christyi
ACHR009203
I
0.914
AATE004759
Anopheles atroparvus
AATE004759
I
0.914
AARA008760
Anopheles arabiensis
AARA008760
I
0.914
ENSONIG00000021146
Oreochromis niloticus
ENSONIG00000021146
I
0.914
ENSXMAG00000019916
Xiphophorus maculatus
ENSXMAG00000019916
I
0.914
ENSDORG00000012788
Dipodomys ordii
ENSDORG00000012788
I
0.914
BHLHE23
Dasypus novemcinctus
ENSDNOG00000036826
I
0.914
bhlhe22
Danio rerio
ENSDARG00000058039
I
0.914
BHLHE22
Cavia porcellus
ENSCPOG00000004652
I
0.914
ENSFALG00000010468
Ficedula albicollis
ENSFALG00000010468
I
0.914
bhlhe22
Gasterosteus aculeatus
ENSGACG00000002995
I
0.914
ENSLACG00000016169
Latimeria chalumnae
ENSLACG00000016169
I
0.914
ENSLACG00000007038
Latimeria chalumnae
ENSLACG00000007038
I
0.914
ENSGMOG00000014009
Gadus morhua
ENSGMOG00000014009
I
0.914
ENSAMXG00000025627
Astyanax mexicanus
ENSAMXG00000025627
I
0.914
BHLHE22
Anolis carolinensis
ENSACAG00000016834
I
0.914
ADAC006720
Anopheles darlingi
ADAC006720
I
0.914
ACYPI000347
Acyrthosiphon pisum
ACYPI000347
I
0.914
AAEL000341
Aedes aegypti
AAEL000341
I
0.914
AGAP009227
Anopheles gambiae
AGAP009227
I
0.914
BGIBMGA003134
Bombyx mori
BGIBMGA003134
I
0.914
DAPPUDRAFT_17020
Daphnia pulex
DAPPUDRAFT_17020
I
0.914
CPIJ000843
Culex quinquefasciatus
CPIJ000843
I
0.914
CapteG184404
Capitella teleta
CapteG184404
I
0.914
ENSLOCG00000017814
Lepisosteus oculatus
ENSLOCG00000017814
I
0.914
BHLHE23
Gallus gallus
ENSGALG00000005718
I
0.914
BHLHE23
Ornithorhynchus anatinus
ENSOANG00000004969
I
0.914
Bhlhe23
Mus musculus
ENSMUSG00000045493
I
0.914
BHLHE23
Monodelphis domestica
ENSMODG00000023267
I
0.914
ENSLOCG00000018362
Lepisosteus oculatus
ENSLOCG00000018362
I
0.914
ENSOARG00000016973
Ovis aries
ENSOARG00000016973
I
0.914
BHLHE22
Myotis lucifugus
ENSMLUG00000002156
I
0.914
BHLHE23
Meleagris gallopavo
ENSMGAG00000006134
I
0.914
ENSOARG00000011555
Ovis aries
ENSOARG00000011555
I
0.912
BHLHE22
Bos taurus
ENSBTAG00000033173
I
0.890
BHLHE23
Bos taurus
ENSBTAG00000010873
I
0.890
TRE_0001403601
Trichobilharzia regenti
TRE_0001403601
I
0.890
Bhlhe22
Mus musculus
ENSMUSG00000025128
D
0.890
BHLHE22
Callithrix jacchus
ENSCJAG00000009234
I
0.890
ENSAMXG00000026338
Astyanax mexicanus
ENSAMXG00000026338
I
0.890
ENSPPYG00000018628
Pongo abelii
ENSPPYG00000018628
I
0.890
LDEC023792
Leptinotarsa decemlineata
LDEC023792
I
0.890
LCUP009688
Lucilia cuprina
LCUP009688
I
0.890
Sjc_0013770
Schistosoma japonicum
Sjc_0013770
I
0.890
ENSCSAG00000018736
Chlorocebus sabaeus
ENSCSAG00000018736
I
0.890
SROB_0002375401
Schistosoma rodhaini
SROB_0002375401
I
0.890
ENSCSAG00000018550
Chlorocebus sabaeus
ENSCSAG00000018550
I
0.890
BHLHE23
Callithrix jacchus
ENSCJAG00000010053
I
0.890
ENSNLEG00000019167
Nomascus leucogenys
ENSNLEG00000019167
I
0.890
LLOJ009613
Lutzomyia longipalpis
LLOJ009613
I
0.890
BHLHE22
Otolemur garnettii
ENSOGAG00000034883
I
0.890
MDOA001134
Musca domestica
MDOA001134
I
0.890
A_00716
Schistosoma haematobium
A_00716
I
0.890
ECPE_0000755301
Echinostoma caproni
ECPE_0000755301
I
0.890
D915_05889
Fasciola hepatica
D915_05889
I
0.890
ACEP10921
Atta cephalotes
ACEP10921
I
0.890
ENSONIG00000020419
Oreochromis niloticus
ENSONIG00000020419
I
0.890
ENSPANG00000006045
Papio anubis
ENSPANG00000006045
I
0.890
AMAM023008
Anopheles maculatus
AMAM023008
I
0.890
Sakowv30001655m.g
Saccoglossus kowalevskii
Sakowv30001655m.g
I
0.890
SMTD_0000281901
Schistosoma mattheei
SMTD_0000281901
I
0.890
SMRZ_0001201801
Schistosoma margrebowiei
SMRZ_0001201801
I
0.890
SCUD_0001512501
Schistosoma curassoni
SCUD_0001512501
I
0.890
BHLHE22
Dasypus novemcinctus
ENSDNOG00000004738
I
0.890
GJ17701
Drosophila virilis
FBgn0204870
I
0.890
GD24118
Drosophila simulans
FBgn0195474
I
0.890
GM17248
Drosophila sechellia
FBgn0172159
I
0.890
GK18164
Drosophila willistoni
FBgn0220163
I
0.890
GE12799
Drosophila yakuba
FBgn0230520
I
0.890
ISCW009607
Ixodes scapularis
ISCW009607
I
0.890
GB45050
Apis mellifera
GB45050
I
0.890
GL14513
Drosophila persimilis
FBgn0152118
I
0.890
GI17928
Drosophila mojavensis
FBgn0140669
I
0.890
Oli
Drosophila melanogaster
FBgn0032651
D
0.890
ENSGMOG00000019833
Gadus morhua
ENSGMOG00000019833
I
0.890
GA18959
Drosophila pseudoobscura
FBgn0078958
I
0.890
GF14803
Drosophila ananassae
FBgn0091830
I
0.890
GH11626
Drosophila grimshawi
FBgn0119106
I
0.890
GG21094
Drosophila erecta
FBgn0113277
I
0.890
MESCA002512
Megaselia scalaris
MESCA002512
I
0.890
NV11426
Nasonia vitripennis
NV11426
I
0.890
ENSMMUG00000028979
Macaca mulatta
ENSMMUG00000028979
I
0.890
BHLHE23
Homo sapiens
ENSG00000125533
D
0.890
BHLHE22
Homo sapiens
ENSG00000180828
D
0.890
Cflo_04767--XP_001122321.1_APIME
Camponotus floridanus
Cflo_04767--XP_001122321.1_APIME
I
0.890
Bhlhe22
Rattus norvegicus
ENSRNOG00000021745
I
0.890
BHLHE22
Monodelphis domestica
ENSMODG00000008228
I
0.890
Hsal_10753--XP_001122321.1_APIME
Harpegnathos saltator
Hsal_10753--XP_001122321.1_APIME
I
0.890
TC014712
Tribolium castaneum
TC014712
I
0.890
BHLHE22
Sus scrofa
ENSSSCG00000006222
I
0.890
SINV14285
Solenopsis invicta
SINV14285
I
0.890
BHLHE23
Gorilla gorilla
ENSGGOG00000025870
I
0.890
BHLHE23
Pan troglodytes
ENSPTRG00000013728
I
0.890
SMAR007739
Strigamia maritima
SMAR007739
I
0.890
Smp_000620
Schistosoma mansoni
Smp_000620
I
0.890
BHLHE22
Oryctolagus cuniculus
ENSOCUG00000012968
I
0.890
CGI_10006402
Crassostrea gigas
CGI_10006402
I
0.858
HelroG128595
Helobdella robusta
HelroG128595
I
0.858