CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr3G23080_001
(
Musa acuminata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GSMUA_Achr3G23080_001
T040096_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ILR3
M01714_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH7211
0.863
0.740
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr3P23080_001
bHLH
71
120
ASKACREKMRRERLNDRFLELNSLLDPGNPPKMDKAAILSDAARLVTQLR
Links
Other
bHLH
family TFs
Other
Musa acuminata
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr11G14790_001
Musa acuminata
GSMUA_Achr11G14790_001
I
0.866
ILR3
Arabidopsis thaliana
AT5G54680
D
0.863
Bra002964
Brassica rapa
Bra002964
I
0.863
Bra022738
Brassica rapa
Bra022738
I
0.863
ILR3
Arabidopsis lyrata
fgenesh2_kg.8__1365__AT5G54680.1
I
0.863
Bostr.26833s0797
Boechera stricta
Bostr.26833s0797
I
0.863
Cagra.1629s0040
Capsella grandiflora
Cagra.1629s0040
I
0.863
Carubv10026758m.g
Capsella rubella
Carubv10026758m.g
I
0.863
Thhalv10014564m.g
Eutrema salsugineum
Thhalv10014564m.g
I
0.863
GLYMA12G34300
Glycine max
GLYMA12G34300
I
0.846
GSMUA_Achr8G33180_001
Musa acuminata
GSMUA_Achr8G33180_001
I
0.838
PRUPE_ppa010730mg
Prunus persica
PRUPE_ppa010730mg
I
0.838