CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0008s19390
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0008s19390
T043845_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0008s19390.1
bHLH
292
341
YKSKNLVTERNRRTRIKTGLFALRALVPKISKMDKAAILGDAIDYVGELL
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0010s05120
Populus trichocarpa
POPTR_0010s05120
N
0.914
SapurV1A.0069s0030
Salix purpurea
SapurV1A.0069s0030
N
0.914
mgf026193m
Mimulus guttatus
mgf026193m
N
0.847
evm.TU.supercontig_69.52
Carica papaya
evm.TU.supercontig_69.52
N
0.846
30131.m006993
Ricinus communis
30131.m006993
I
0.839
cassava7475.valid.m1
Manihot esculenta
cassava7475.valid.m1
I
0.839