CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0016s06900
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0016s06900
T043914_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0016s06900.1
bHLH
258
307
KVTKHFATERQRREHLNGKYTALRNLVPNPSKNDRASVVGEAIDYIKELL
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0980s0060
Salix purpurea
SapurV1A.0980s0060
N
0.914
POPTR_0006s21660
Populus trichocarpa
POPTR_0006s21660
N
0.893
SapurV1A.1209s0060
Salix purpurea
SapurV1A.1209s0060
N
0.893
SapurV1A.4240s0010
Salix purpurea
SapurV1A.4240s0010
N
0.893
cassava15897.m1
Manihot esculenta
cassava15897.m1
N
0.848
cassava21952.m1
Manihot esculenta
cassava21952.m1
N
0.848
Ciclev10019669m.g
Citrus clementina
Ciclev10019669m.g
N
0.846
orange1.1g009555m.g
Citrus sinensis
orange1.1g009555m.g
N
0.846