SKUD_191104 (Saccharomyces kudriavzevii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 SKUD_191104 T044878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBF1
M00374_2.00 		Saccharomyces cerevisiae
NCACGTGAY
RTCACGTGN		 PBM
Berger et al.(2006)
Cbf1 		0.893 0.980
CBF1
M01520_2.00 		Saccharomyces cerevisiae
CACGTGAYH
DRTCACGTG		 PBM
Zhu et al.(2009)
Cbf1 		0.893 0.980
CBF1
M07440_2.00 		Saccharomyces cerevisiae
TCACGTGH
DCACGTGA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0281.1 		0.893 0.980
CBF1
M08485_2.00 		Saccharomyces cerevisiae
NCAYRTGN
NCAYRTGN		 Misc
DeBoer et al.(2011)
YJR060W_1347 		0.893 0.980
CBF1
M09483_2.00 		Saccharomyces cerevisiae
KCACGTGAYN
NRTCACGTGM		 Misc
Heinz et al.(2010)
Yeast-Cbf1_GSE29506 		0.893 0.980
CBF1
M09897_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_02 		0.893 0.980
CBF1
M09898_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_03 		0.893 0.980
CBF1
M09899_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_04 		0.893 0.980
CBF1
M09900_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_B 		0.893 0.980
CBF1
M09901_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_Q6 		0.893 0.980
CBF1
M00010_2.00 		Saccharomyces cerevisiae
NDCACGTGANN
NNTCACGTGHN		 PBM
Badis et al.(2008)
CBF1_2160 		0.882 0.959
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT41544 bHLH 226 274

Links

Other bHLH family TFs
Other Saccharomyces kudriavzevii TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
12421_YJR060W Saccharomyces mikatae 12421_YJR060W I 0.914
12538_YJR060W Saccharomyces paradoxus 12538_YJR060W I 0.914
13072_YJR060W Saccharomyces bayanus 13072_YJR060W I 0.914
SAKL0D12650g Lachancea kluyveri SAKL0D12650g I 0.914
Kpol_1054p48 Vanderwaltozyma polyspora Kpol_1054p48 I 0.894
TBLA_0D03730 Tetrapisispora blattae TBLA_0D03730 I 0.894
CBF1 Saccharomyces cerevisiae YJR060W D 0.893
KLTH0C02640g Lachancea thermotolerans KLTH0C02640g I 0.888
TDEL_0F00520 Torulaspora delbrueckii TDEL_0F00520 I 0.888
TPHA_0F03530 Tetrapisispora phaffii TPHA_0F03530 I 0.888
ZBAI_00952 Zygosaccharomyces bailii ZBAI_00952 I 0.888
ZBAI_06241 Zygosaccharomyces bailii ZBAI_06241 I 0.888
ZYRO0G04466g Zygosaccharomyces rouxii ZYRO0G04466g I 0.888
KLTH0C02640g Kluyveromyces thermotolerans KLTH0C02640g I 0.888
Kwal_9999 Kluyveromyces waltii Kwal_9999 I 0.888
KAFR_0D03630 Kazachstania africana KAFR_0D03630 I 0.884
KNAG_0B00250 Kazachstania naganishii KNAG_0B00250 I 0.882
AACERI_AaceriAFR414W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR414W I 0.877
AGOS_AFR414W Ashbya gossypii AGOS_AFR414W I 0.877
Ecym_3159 Eremothecium cymbalariae Ecym_3159 I 0.877
LALA0_S07e03906g Lachancea lanzarotensis LALA0_S07e03906g I 0.864
NCAS_0A12210 Naumovozyma castellii NCAS_0A12210 I 0.860
Scas_Contig673.33 Saccharomyces castellii Scas_Contig673.33 I 0.860
NDAI_0A04030 Naumovozyma dairenensis NDAI_0A04030 N 0.857
KLLA0_B13761g Kluyveromyces lactis KLLA0_B13761g N 0.845