CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29631.m001025
(
Ricinus communis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
29631.m001025
T047846_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29631.m001025
bHLH
301
348
SKNLVTERNRRNRIKDGLYTLRALVPKITKMDIASILGDAIEYIGELQ
Links
Other
bHLH
family TFs
Other
Ricinus communis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_69.52
Carica papaya
evm.TU.supercontig_69.52
N
0.888
GSMUA_Achr3G00640_001
Musa acuminata
GSMUA_Achr3G00640_001
N
0.887
gene00631-v1.0-hybrid
Fragaria vesca
gene00631-v1.0-hybrid
N
0.882
cassava27372.m1
Manihot esculenta
cassava27372.m1
N
0.874
OBART04G06800
Oryza barthii
OBART04G06800
N
0.866
OGLUM04G06590
Oryza glumaepatula
OGLUM04G06590
N
0.866
OMERI03G04040
Oryza meridionalis
OMERI03G04040
N
0.866
OPUNC04G05620
Oryza punctata
OPUNC04G05620
N
0.866
ORGLA04G0051300
Oryza glaberrima
ORGLA04G0051300
N
0.866
ORUFI04G07840
Oryza rufipogon
ORUFI04G07840
N
0.866
OS04G0300600
Oryza sativa
OS04G0300600
N
0.866
30131.m006993
Ricinus communis
30131.m006993
I
0.862
cassava7475.valid.m1
Manihot esculenta
cassava7475.valid.m1
I
0.862
PGSC0003DMG400017440
Solanum tuberosum
PGSC0003DMG400017440
I
0.855
Solyc05g014590.2
Solanum lycopersicum
Solyc05g014590.2
I
0.855
estExt_fgenesh1_pg.C_1240017
Physcomitrella patens
estExt_fgenesh1_pg.C_1240017
I
0.854
gw1.90.96.1
Physcomitrella patens
gw1.90.96.1
I
0.854
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.851
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.851
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.851
POPTR_0006s07420
Populus trichocarpa
POPTR_0006s07420
I
0.851
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.851
Aquca_072_00056
Aquilegia coerulea
Aquca_072_00056
I
0.851
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.851
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.851
Lus10030609.g
Linum usitatissimum
Lus10030609.g
N
0.844
BGIOSGA015389
Oryza indica
BGIOSGA015389
N
0.842
ONIVA01G07150
Oryza nivara
ONIVA01G07150
N
0.842