CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava39091.m1
(
Manihot esculenta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
cassava39091.m1
T048077_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava39091.m1
bHLH
20
61
DQIVDLVSKLQQLIPEIRSSRSDKVSASKVLQETCNYIRRLH
Links
Other
bHLH
family TFs
Other
Manihot esculenta
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.J01215
Eucalyptus grandis
Eucgr.J01215
N
0.891
cassava35255.valid.m1
Manihot esculenta
cassava35255.valid.m1
N
0.864
29736.m002007
Ricinus communis
29736.m002007
N
0.846
Eucgr.B03420
Eucalyptus grandis
Eucgr.B03420
N
0.846
GLYMA04G34080
Glycine max
GLYMA04G34080
N
0.843
GLYMA06G20400
Glycine max
GLYMA06G20400
N
0.843
GLYMA13G05280
Glycine max
GLYMA13G05280
N
0.843
GLYMA19G02510
Glycine max
GLYMA19G02510
N
0.843
SapurV1A.1252s0010
Salix purpurea
SapurV1A.1252s0010
N
0.843
LjSGA_010689.2
Lotus japonicus
LjSGA_010689.2
N
0.843
Ciclev10033182m.g
Citrus clementina
Ciclev10033182m.g
N
0.841