CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_134000046
(
Branchiostoma floridae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
fgenesh2_pg.scaffold_134000046
T048558_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_134000046
bHLH
52
109
RRNAHTAAEQKRRDAIKKGYDELQQMVPTCQTQDQIGSQKLSKATVLQRSIDYISFLV
Links
Other
bHLH
family TFs
Other
Branchiostoma floridae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.405.20.1
Branchiostoma floridae
e_gw.405.20.1
N
0.914
CGI_10011729
Crassostrea gigas
CGI_10011729
N
0.890
SPU_005787
Strongylocentrotus purpuratus
SPU_005787
N
0.865