CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chc-1
(
Neurospora crassa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
NCU00749
T051536_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
chc-1
M01760_2.00
Neurospora crassa
NNNDYRHNNN
NNNDYRHNNN
PBM
Weirauch et al.(2014)
pTH8798
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.838
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01760_2.00
bHLH
52
128
ARVNHNQVEKQYRNRLHEYFDNLLKVLPDNPGMMEPKAEPENDDESQSSSSASGRKSRNWSKAEVLERACHHIHELQ
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU00749
bHLH
318
394
ARVNHNQVEKQYRNRLHEYFDNLLKVLPDNPGMMEPKAEPENDDESQSSSSASGRKSRNWSKAEVLERACHHIHELQ
Links
Other
bHLH
family TFs
Other
Neurospora crassa
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_89826
Neurospora tetrasperma
NEUTE1DRAFT_89826
I
0.914
estExt_fgenesh2_pg.C_40643
Neurospora discreta
estExt_fgenesh2_pg.C_40643
I
0.914
SMAC_01434
Sordaria macrospora
SMAC_01434
I
0.841